Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831443.1_cds_XP_016504525.1_17960
CDS Infomation

[gene=LOC107822487] [db_xref=GeneID:107822487] [protein=zinc finger MYM-type protein 1-like] [partial=3'] [protein_id=XP_016504525.1] [location=complement(join(<93..491,555..877,975..1857))] [gbkey=CDS]
Sequence

ATGTTAGACTTATCACATCAATCCCAATCAATTCAAGTTGCTTTTGATAAGCAATCTGAG
AAACAAAGAAATGAGCACCGAATTCGTTTAAATGCATCAATCGATGTTGCAAGGTTCCTC
TTGTACTTTGGATTGTCTTTTAGAGGTCACGATAAAAGTGATTCTTCAAAAAATAAAGGC
CTTTTTCTAGGGCTTTTGGAATGGCTTGCAAAGAGGCTCCCTCAAGTGGATAGAGTCATA
TTGAAACATGCTCCAAAAAATGATATGATGACTTCGCCAAAAATTCAAAAGGACATTGTG
GGTGCTTGTGCACAAGAAACCGTGAAAGTTATAATCAATGATTTAGATGGGGATTATTTC
GGGATATTAGTTGATGAGTCCAAGGATATTTCACACCATGAACAAATGGCCCTCGCTTTG
CGGTATGTTGACAAAAAAGGCCAAGTGAACGAGCCATTTATTGGTCTTGTTCGTGTTGGT
GATACCTCTGCAAAATCGTTGAAGGAAGCAATACTTTCTTTGCTTATGAAACACTCATTA
AGTCCATCCAAAATACGCGGACAAGGGTATGATGGAGCTAGTAATATGCAAGGAAAAATG
AATGGTCTTAAAGCTTTAATTTTGCAAGAAACTCCTTCGGCACATTGCATTCATTGTTTT
GCTCATCAATTACAGTTGACGCTTGTAGCGGTTGCTAAAAAACATAAGGAGGTGAAAACT
TTCTTTGCTATAGTTTCTAATGTCTTGAATGTGATTGGAGTATCCTTTAAACGTAGAGAT
AAACTTCGGGACCATCAAGCAGAATTATTAGAGCAGTTGCTAGAGAGTGGTGAAGTTCAA
AGTGGGAAAGAATTAAATCAAGAACGAGGGCTTCAAAGGCCAGGTTCCGAGGCTAATGAT
AGATTGCAAGCAGAAGTCTTTTTGAGTAAAATTAATTCATTTGAATTTGTGTTCATGCTT
CACTTGATGTTGAAGGTATTATTGATGTCGAACGAGCTGAGTAAAGCTTTACAGAAGAAA
GAGCAAGATATTGTCAATGCCATGATATTTCTTAACCTTACAAAGGATAGGTTGCAACAA
ATGAGAAATGAAGGATGGAAATCATTAATGGATGAAGTCTCTTTGTTTTGTGCTAAACAT
GACATTTTGGTGCCCAATATGGAAGAATTCTATATTCCTGGAAAGTCAAAGCGTAGGCCT
TCTAGTGAGCTTAACAGTCATTTTGATGTTGTTAGTGGTAACTTGCTTCTTGGTATGGCT
AGCTTGAATCCAGCTAATTCGTTTGCTAATTTTGATAAGGAAAGAATAATGACATTGGCC
AAGTATTATCCAGATGAGTTTGGTGAATTGAAGCTTCGAGATCTTAGTCACCAACTTGAC
ACTTTCATATTGCACATGAAACATGGTGACCCTAGATTCTCGGATTTGAAAGGAATTGGT
GATTTGGCAAAAGCGTTGGTTGAAGCAAATCTTGTGGAGGCATATTCACTTATTTATTTA
CTTATAAAGTTGATTCTAATTTTACCTGTCACGACTGCAACGGTAGAAAGAGCATTCTCA
TCCATGAAGTACATCAAAGATGAATTGCGTAGTAGTATTGGTGAT

Peptide Sequence

PEP ID

XP_016504525.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like, partial [Nicotiana tabacum]
Sequence

MLDLSHQSQSIQVAFDKQSEKQRNEHRIRLNASIDVARFLLYFGLSFRGHDKSDSSKNKG
LFLGLLEWLAKRLPQVDRVILKHAPKNDMMTSPKIQKDIVGACAQETVKVIINDLDGDYF
GILVDESKDISHHEQMALALRYVDKKGQVNEPFIGLVRVGDTSAKSLKEAILSLLMKHSL
SPSKIRGQGYDGASNMQGKMNGLKALILQETPSAHCIHCFAHQLQLTLVAVAKKHKEVKT
FFAIVSNVLNVIGVSFKRRDKLRDHQAELLEQLLESGEVQSGKELNQERGLQRPGSEAND
RLQAEVFLSKINSFEFVFMLHLMLKVLLMSNELSKALQKKEQDIVNAMIFLNLTKDRLQQ
MRNEGWKSLMDEVSLFCAKHDILVPNMEEFYIPGKSKRRPSSELNSHFDVVSGNLLLGMA
SLNPANSFANFDKERIMTLAKYYPDEFGELKLRDLSHQLDTFILHMKHGDPRFSDLKGIG
DLAKALVEANLVEAYSLIYLLIKLILILPVTTATVERAFSSMKYIKDELRSSIGD

Transcript Sequence

Gene sequence data has not been registered.